Bioinformatics: from Algorithms to Applications 2019 has ended

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Bioinformatics: from Algorithms to Applications 2019

11:00 MSK

Synteny paths for assembly graphs comparison High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Evgeny Polevikov

11:20 MSK

Indexing De Bruijn graphs with minimizers High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Camille Marchet

11:40 MSK

PathRacer: racing profile HMM paths on assembly graph High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Alexander Shlemov

13:30 MSK

Recovery of closed genomes of member species from enrichment reactor microbial communities using long read metagenomics High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Krithika Arumugam

13:50 MSK

Computational vision to detect chromosomal loops High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Axel Cournac

14:10 MSK

Whole-chromosome assembly and analysis of hybridogenetic lineages of the desert ant Cataglyphis hispanica with instaGRAAL, a Hi-C based scaffolder and polisher High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Lyam Baudry

16:30 MSK

SPAligner: alignment of long diverged molecular sequences to assembly graphs High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Dmitry Antipov

16:50 MSK

Million sequences indexing High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Antoine Limasset

17:10 MSK

Hybrid RNA-Seq assembly and its application to transcriptome study of Cynara cardunculus High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Andrey Prjibelski

17:30 MSK

Combinatorial Scoring of Phylogenetic Trees and Networks Based on Homoplasy-Free Characters High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Max Alekseyev

11:00 MSK

Higher-order and multidimensional epistasis in high-throughput experimental data High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Dmitry Ivankov

13:00 MSK

Dysbiosis signatures from metagenomes reveal differences and similarities between inflammatory diseases High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Vadim Dubinsky

13:20 MSK

On the Verge of Colistin Resistance: Genetic Determinants Mediating Intermediate Colistin Resistance in Klebsiella pneumoniae High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Sima Tokajian

13:40 MSK

Antimicrobial Resistance and Clonality of Streptococcus pneumoniae Isolates in Russia High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Irina Tsvetkova

16:30 MSK

Computational biology and agriculture: soil microbiome High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Evgeny Andronov

16:50 MSK

Revealing mechanisms of the Bacillus thuringiensis host specificity via modeling coevolution of Cry toxins and their receptors High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Yury V. Malovichko

17:10 MSK

Genomic determinants underlying rodenticidal properties of the Salmonella enteritidis var. Issatschenko High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Kirill Antonets

17:30 MSK

Bacteriophage recombination site helps to reveal genes potentially acquired through horizontal gene transfer. High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Maria A. Daugavet

11:00 MSK

A universal transcriptomic signature of age reveals the temporal scaling of Caenorhabditis elegans aging trajectories High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Andrei E. Tarkhov

11:20 MSK

DASE-AG: conditional-specific differential alternative splicing events estimation method for around-gap regions High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Kouki Yonezawa

13:15 MSK

NPS: scoring and evaluating the statistical significance of peptidic natural product–spectrum matches High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Alexey Gurevich

13:35 MSK

Local sequence alignment using intra-processor parallelism High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Alexander Tiskin

13:55 MSK

HEDGE: Highly accurate GPU-powered protein-protein docking pipeline High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Timofei Ermak

14:15 MSK

Probabilistic model of V-D junction formation in human Ig heavy chain genes and its application High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Evgeny A. Bakin

17:00 MSK

Reconstructing haplotype-specific cancer genome karyotypes with multiple sequencing technologies High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Sergey Aganezov

17:20 MSK

In pursuit of molecular mechanism for induced granulocytic differentiation: systems biology approach High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Svetlana Novikova

17:40 MSK

Gene Set Mining In Context Relevant Pubmed Corpora High School of Management SPbU “Mikhailovskaya Dacha”; room 1221Christophe Van Neste